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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3904982_3905732_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3904982 - 3905732

Intron Length:

751

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAGGCA

5'SS Class:

major

3'SS Sequence:

TTCTGACCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

GCTTTCTGACCT

Flanking Amino Acid:

VETPRLSALKRLKTTEEAGA

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

60.2

38.8

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

76.5

0.6

0.9

66.7

39.6

Minor 5ss

27.8

-2.5

3.7

38.8

46.4

Minor BPS

55.5

0.25

1.8

72.98

43.9

Associated Gene:

Gene:

UBXN11

Ensembl Gene ID:

ENSAPLG00000008598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026426

3896968 - 3906957

9990

ENSAPLT00000008939

3896376 - 3906957

10582