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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3905880_3906782_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3905880 - 3906782

Intron Length:

903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGTGA

5'SS Class:

major

3'SS Sequence:

TGTTCTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGCAT

U12 Branch Point Sequence:

TTGTGCATAGGA

Flanking Amino Acid:

GDLRQHLARARGGDSGSYEI

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

66.6

41.6

Major BPS

59.8

0.25

1.5

71.4

45.1

Major PPT

79.8

0.67

0.8

73.3

37.1

Minor 5ss

34.7

-1.7

3.5

46.6

48.7

Minor BPS

42.8

-0.5

2.4

59.91

45.9

Associated Gene:

Gene:

UBXN11

Ensembl Gene ID:

ENSAPLG00000008598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026426

3896968 - 3906957

9990

ENSAPLT00000008939

3896376 - 3906957

10582