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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3912842_3913950_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3912842 - 3913950

Intron Length:

1109

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCA|GCAGGTCAT

5'SS Class:

major

3'SS Sequence:

AAAGCACTCCTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTGACTGCAAAT

Flanking Amino Acid:

HIGTQTHNLLFTQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.29

1.4

61.1

43.6

Major BPS

73.8

0.59

0.9

26.8

Major PPT

52.3

0.05

0.9

38.5

Minor 5ss

26.4

-2.7

4.1

45.7

43.6

Minor BPS

44.4

-0.3

2.2

66.05

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028695

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041649

3912828 - 3916506

3679