Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_3912878_3913145_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3912878 - 3913145

Intron Length:

268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TCTGACTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

CTCTCTCTGACT

Flanking Amino Acid:

PNLSLLLGIRSAQYSAKEKD

Intron Amino Acid Position:

768

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

83.8

34.5

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

71.4

0.48

0.9

61.9

39.6

Minor 5ss

41.8

-0.9

2.8

56.1

41.3

Minor BPS

0.36

1.7

75.42

41.9

Associated Gene:

Gene:

CEP85

Ensembl Gene ID:

ENSAPLG00000008105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046411

3912714 - 3922268

9555

ENSAPLT00000008440

3912714 - 3922566

9853