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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3914117_3914198_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3914117 - 3914198

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTGTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTAGAT

U12 Branch Point Sequence:

GTTAGATTTACT

Flanking Amino Acid:

KMEQLSLKVKNLEEQVAQEE

Intron Amino Acid Position:

656

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

35.2

Major BPS

61.4

0.28

1.3

60.7

45.9

Major PPT

77.5

0.62

0.9

68.7

Minor 5ss

26.7

-2.7

3.3

38.5

46.6

Minor BPS

46.4

-0.2

2.3

71.26

44.8

Associated Gene:

Gene:

CEP85

Ensembl Gene ID:

ENSAPLG00000008105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046411

3912714 - 3922268

9555

ENSAPLT00000008440

3912714 - 3922566

9853