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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3915470_3915745_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3915470 - 3915745

Intron Length:

276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACCT

5'SS Class:

strong_major

3'SS Sequence:

ATTGCCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

AGTGTTGTGATT

Flanking Amino Acid:

LEDHQKQNQKLKECELKSTA

Intron Amino Acid Position:

547

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.4

38.4

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

80.4

0.68

0.9

73.7

36.2

Minor 5ss

-1.8

3.3

49.1

46.6

Minor BPS

44.2

-0.3

60.24

38.2

Associated Gene:

Gene:

CEP85

Ensembl Gene ID:

ENSAPLG00000008105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046411

3912714 - 3922268

9555

ENSAPLT00000008440

3912714 - 3922566

9853