Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_3916952_3917788_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3916952 - 3917788

Intron Length:

837

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATTAT

U12 Branch Point Sequence:

TGTTTCTCTACA

Flanking Amino Acid:

LLKEKELLIDRQRQHISQLE

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

0.42

1.3

60.1

46.3

Major PPT

86.5

0.82

0.7

80.7

31.4

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

57.1

0.22

1.9

72.19

39.3

Associated Gene:

Gene:

CEP85

Ensembl Gene ID:

ENSAPLG00000008105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046411

3912714 - 3922268

9555

ENSAPLT00000008440

3912714 - 3922566

9853