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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3917923_3918582_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3917923 - 3918582

Intron Length:

660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGGC

5'SS Class:

major

3'SS Sequence:

TCTCCTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATAAAC

U12 Branch Point Sequence:

TCTCCCTTGTTG

Flanking Amino Acid:

NVRLQIEQMQLQNGGACHHP

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

67.5

37.8

Major BPS

52.3

0.06

60.6

31.5

Major PPT

86.7

0.83

0.7

84.4

23.4

Minor 5ss

28.2

-2.5

3.7

40.6

Minor BPS

43.3

-0.6

3.5

59.59

42.9

Associated Gene:

Gene:

CEP85

Ensembl Gene ID:

ENSAPLG00000008105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046411

3912714 - 3922268

9555

ENSAPLT00000008440

3912714 - 3922566

9853