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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3919308_3921468_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3919308 - 3921468

Intron Length:

2161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTGTAATTAAAG

Flanking Amino Acid:

IGTSCSDSTEDFCNSSNGSS

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

81.6

30.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

79.3

0.66

0.7

73.1

31.8

Minor 5ss

37.3

-1.4

3.3

52.6

44.6

Minor BPS

51.7

-0

63.27

43.8

Associated Gene:

Gene:

CEP85

Ensembl Gene ID:

ENSAPLG00000008105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046411

3912714 - 3922268

9555

ENSAPLT00000008440

3912714 - 3922566

9853