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Intron Name: Anas_platyrhynchos_platyrhynchos_24_392200_394810_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

392200 - 394810

Intron Length:

2611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTGGTCTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAA

U12 Branch Point Sequence:

GTACCATTAAAC

Flanking Amino Acid:

SSYFNLNPFEVLQMDPDATD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.1

73.9

42.7

Major BPS

70.2

0.5

71.6

30.1

Major PPT

76.5

0.6

0.9

74.4

36.5

Minor 5ss

34.2

-1.8

2.8

41.7

44.8

Minor BPS

54.9

0.13

1.7

64.99

39.2

Associated Gene:

Gene:

DNAJC8

Ensembl Gene ID:

ENSAPLG00000003576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029446

211818 - 406228

194411

ENSAPLT00000003669

211818 - 406228

194411