Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_3922269_3922470_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3922269 - 3922470

Intron Length:

202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

TATTGCCTTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTTATT

Flanking Amino Acid:

LSSQARRNPALTGTNKMAAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

72.9

36.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.7

0.6

0.9

70.6

35.8

Minor 5ss

37.5

-1.4

3.3

56.3

41.9

Minor BPS

61.1

0.43

1.9

84.61

35.7

Associated Gene:

Gene:

CEP85

Ensembl Gene ID:

ENSAPLG00000008105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008440

3912714 - 3922566

9853