Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_3924568_3924642_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3924568 - 3924642

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGAGCC

5'SS Class:

major

3'SS Sequence:

TTTTCCGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAAAC

U12 Branch Point Sequence:

CACCCCAAAAAA

Flanking Amino Acid:

AVRALQSTLKAKLAELQALE

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

63.2

36.7

Major BPS

47.7

-0.1

51.4

28.5

Major PPT

76.4

0.59

73.2

37.1

Minor 5ss

24.9

-2.9

3.3

32.9

42.4

Minor BPS

42.3

-0.5

1.9

48.22

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008322

3921898 - 3926358

4461