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Intron Name: Anas_platyrhynchos_platyrhynchos_24_394868_396587_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

394868 - 396587

Intron Length:

1720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTGGC

5'SS Class:

major

3'SS Sequence:

CTTTCTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TTTACAATGATC

Flanking Amino Acid:

DEEIKKRFRQLSILVHPDKN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

65.1

39.3

Major BPS

83.8

0.84

73.6

41.8

Major PPT

89.5

0.89

0.6

84.5

23.2

Minor 5ss

39.2

-1.2

3.1

44.1

Minor BPS

49.3

-0

1.9

68.99

36.1

Associated Gene:

Gene:

DNAJC8

Ensembl Gene ID:

ENSAPLG00000003576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029446

211818 - 406228

194411

ENSAPLT00000003669

211818 - 406228

194411