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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3951651_3954258_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3951651 - 3954258

Intron Length:

2608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATGAA

5'SS Class:

major

3'SS Sequence:

TTCCTTGTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTTAT

U12 Branch Point Sequence:

GTAGTTATGACG

Flanking Amino Acid:

HGSSSSLYLQLVETSLKGEI

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

71.1

34.6

Major BPS

73.5

0.58

1.2

63.7

43.9

Major PPT

84.5

0.78

0.8

79.8

32.1

Minor 5ss

30.3

-2.3

3.4

46.1

Minor BPS

44.8

-0.5

1.7

47.98

39.6

Associated Gene:

Gene:

PDIK1L

Ensembl Gene ID:

ENSAPLG00000010422

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010846

3950910 - 3956077

5168