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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3959764_3960064_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3959764 - 3960064

Intron Length:

301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCCACGG

5'SS Class:

weak_major

3'SS Sequence:

TGTCCCTACCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

CTGTCCCTACCC

Flanking Amino Acid:

PLQSVFQGQKSELNNCISML

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

1.2

44.5

45.1

Major BPS

84.8

0.86

85.7

34.9

Major PPT

70.4

0.46

0.9

62.2

38.9

Minor 5ss

30.4

-2.2

3.2

39.4

45.9

Minor BPS

52.7

0.06

66.79

Associated Gene:

Gene:

TRIM63

Ensembl Gene ID:

ENSAPLG00000010297

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040418

3957685 - 3989823

32139

ENSAPLT00000010740

3957685 - 3962244

4560