Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_3963529_3963610_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3963529 - 3963610

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTACGTACG

5'SS Class:

major

3'SS Sequence:

GCCCTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAC

U12 Branch Point Sequence:

GGGATGTCACCG

Flanking Amino Acid:

TSACAVAVNIVMGVALHQTG

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.2

59.4

45.2

Major BPS

66.1

0.4

1.2

69.1

37.9

Major PPT

64.6

0.33

0.9

57.1

33.4

Minor 5ss

-1.5

2.9

43.2

Minor BPS

34.5

-1.3

2.1

33.22

40.2

Associated Gene:

Gene:

SLC30A2

Ensembl Gene ID:

ENSAPLG00000026102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019360

3962407 - 3964492

2086