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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3965542_3965624_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3965542 - 3965624

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGGGGG

5'SS Class:

major

3'SS Sequence:

TCCCCCCGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAA

U12 Branch Point Sequence:

AGCCCCTGAACC

Flanking Amino Acid:

QHKEAVPQQQVKGTAPSSSR

Intron Amino Acid Position:

667

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.2

59.9

44.9

Major BPS

57.2

0.18

1.1

48.9

36.6

Major PPT

65.5

0.35

0.9

33.4

Minor 5ss

-2.9

3.2

29.9

43.1

Minor BPS

60.2

0.3

1.5

64.52

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044236

3964708 - 3971251

6544