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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3966055_3966241_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3966055 - 3966241

Intron Length:

187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTGTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TCCCTGTTGATG

Flanking Amino Acid:

DEDSSLSTSEVDFAFVVWRS

Intron Amino Acid Position:

555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

63.2

0.3

38.8

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

44.1

-0.6

2.1

46.44

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044236

3964708 - 3971251

6544