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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3966505_3966905_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3966505 - 3966905

Intron Length:

401

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGGGA

5'SS Class:

major

3'SS Sequence:

CACCCTGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TGCTTTTCCACC

Flanking Amino Acid:

AVSRSQYCAQILVLWSCEEP

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

60.1

40.8

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

68.3

0.41

0.9

34.7

Minor 5ss

21.7

-3.3

3.4

28.5

43.8

Minor BPS

46.8

-0.2

1.9

58.24

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044236

3964708 - 3971251

6544