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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3970850_3971182_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3970850 - 3971182

Intron Length:

333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGGGA

5'SS Class:

major

3'SS Sequence:

TCTCGCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCGCAC

U12 Branch Point Sequence:

ACGCCTCGCACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

64.2

42.1

Major BPS

49.1

-0

1.3

60.7

37.6

Major PPT

72.4

0.5

0.8

65.6

30.3

Minor 5ss

27.5

-2.6

3.6

38.1

46.8

Minor BPS

38.5

-0.9

1.9

43.48

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044236

3964708 - 3971251

6544