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Intron Name: Anas_platyrhynchos_platyrhynchos_24_398271_399452_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

398271 - 399452

Intron Length:

1182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTTAC

5'SS Class:

major

3'SS Sequence:

TTGTGTTCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

ATTATTTTAAGA

Flanking Amino Acid:

PNVEEDDPEVFKQAVYKQTM

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

73.1

31.9

Major BPS

84.4

0.85

34.5

Major PPT

0.63

0.9

72.5

37.8

Minor 5ss

43.1

-0.8

2.8

58.5

40.5

Minor BPS

59.8

0.3

1.6

69.65

36.8

Associated Gene:

Gene:

DNAJC8

Ensembl Gene ID:

ENSAPLG00000003576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003669

211818 - 406228

194411

ENSAPLT00000029446

211818 - 406228

194411