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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3989060_3989167_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

3989060 - 3989167

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGCAGTCA

5'SS Class:

weak_major

3'SS Sequence:

CTTTGTTACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

TCTTTGTTACGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.16

1.1

49.8

37.4

Major BPS

71.4

0.53

1.2

63.4

Major PPT

77.3

0.61

0.9

36.4

Minor 5ss

29.4

-2.4

3.4

29.8

43.2

Minor BPS

44.8

-0.4

2.4

60.68

45.3

Associated Gene:

Gene:

STMN1

Ensembl Gene ID:

ENSAPLG00000009986

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010405

3988742 - 3991845

3104