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Intron Name: Anas_platyrhynchos_platyrhynchos_24_3991019_3991344_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3991019 - 3991344

Intron Length:

326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTGGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

TGCGGCTCACTG

Flanking Amino Acid:

AAKLERLREKDKHIEEVRKN

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

85.2

32.2

Major BPS

52.1

0.05

1.3

41.8

Major PPT

0.63

73.5

41.8

Minor 5ss

37.2

-1.4

3.6

57.3

47.4

Minor BPS

38.3

-1

2.1

39.4

44.7

Associated Gene:

Gene:

STMN1

Ensembl Gene ID:

ENSAPLG00000009986

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010405

3988742 - 3991845

3104