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Intron Name: Anas_platyrhynchos_platyrhynchos_24_400569_406035_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

400569 - 406035

Intron Length:

5467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATCAGC

5'SS Class:

major

3'SS Sequence:

CTGTTTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

AACTCCTTAACC

Flanking Amino Acid:

REREWQKNFEESRDGRVDSW

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

42.1

Major BPS

74.6

0.61

65.6

41.4

Major PPT

80.3

0.68

0.8

72.9

37.4

Minor 5ss

39.8

-1.1

2.8

52.6

44.1

Minor BPS

80.4

0.93

1.1

78.23

37.1

Associated Gene:

Gene:

DNAJC8

Ensembl Gene ID:

ENSAPLG00000003576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003669

211818 - 406228

194411