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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4016694_4016741_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4016694 - 4016741

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACG|GCGAGGAGG

5'SS Class:

major

3'SS Sequence:

CCGGGCTCCGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTGGAC

U12 Branch Point Sequence:

CGGAGCTGGACG

Flanking Amino Acid:

ADAFPKDFGYGPGGGGGAGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.3

42.9

Major BPS

42.6

-0.4

1.4

36.7

42.3

Major PPT

45.8

-0.2

1.6

45.7

36.6

Minor 5ss

16.4

-3.9

3.5

22.4

37.3

Minor BPS

41.6

-0.8

40.53

43.6

Associated Gene:

Gene:

RRAGC

Ensembl Gene ID:

ENSAPLG00000009835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010254

4016585 - 4025070

8486