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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4016858_4019198_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4016858 - 4019198

Intron Length:

2341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTCAA

U12 Branch Point Sequence:

GTTCTTTTAACA

Flanking Amino Acid:

RRSGKSSIQKVVFHKMSPNE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

34.7

Major BPS

0.23

1.1

61.4

36.2

Major PPT

80.7

0.69

0.9

76.9

Minor 5ss

31.2

-2.2

3.2

38.8

46.5

Minor BPS

72.9

0.71

1.1

77.15

33.2

Associated Gene:

Gene:

RRAGC

Ensembl Gene ID:

ENSAPLG00000009835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010254

4016585 - 4025070

8486