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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4019403_4020078_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4019403 - 4020078

Intron Length:

676

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTCT

5'SS Class:

strong_major

3'SS Sequence:

AACTTATTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTCATT

Flanking Amino Acid:

GALIYVIDAQDDYMEALTRL

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

33.4

Major BPS

100

1.24

0.5

100

Major PPT

76.8

0.6

0.9

69.4

39.9

Minor 5ss

48.4

-0.1

2.5

68.6

42.1

Minor BPS

65.8

0.58

89.07

35.8

Associated Gene:

Gene:

RRAGC

Ensembl Gene ID:

ENSAPLG00000009835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010254

4016585 - 4025070

8486