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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4022862_4023731_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4022862 - 4023731

Intron Length:

870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CATTCTTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

CTTGGGTTAACT

Flanking Amino Acid:

DVVIDVSCIYGLKEDGTGSA

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

75.8

34.3

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

78.1

0.63

0.8

31.3

Minor 5ss

32.5

-2

3.1

35.2

41.4

Minor BPS

48.9

-0

2.5

47.8

Associated Gene:

Gene:

RRAGC

Ensembl Gene ID:

ENSAPLG00000009835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010254

4016585 - 4025070

8486