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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4023881_4024918_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4023881 - 4024918

Intron Length:

1038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAG

U12 Branch Point Sequence:

CTCTCCTTGACA

Flanking Amino Acid:

ILREESFERKGLIDYNFHCF

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

31.7

Major BPS

47.4

-0.1

1.5

42.8

41.8

Major PPT

75.3

0.57

0.9

71.5

Minor 5ss

31.7

-2.1

3.3

42.5

44.5

Minor BPS

77.8

0.87

1.2

78.25

38.8

Associated Gene:

Gene:

RRAGC

Ensembl Gene ID:

ENSAPLG00000009835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010254

4016585 - 4025070

8486