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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4123846_4124703_F

Intron Information:

Intron Rank:

138483

Intron Class:

major

Intron Phase:

Intron Coordinates:

4123846 - 4124703

Intron Length:

858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

TGTTTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

TGTGTCACAGCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

68.4

36.6

Major BPS

75.6

0.64

1.5

34.5

Major PPT

89.6

0.89

0.7

84.7

30.1

Minor 5ss

35.9

-1.6

3.2

51.5

44.9

Minor BPS

-0.3

65.74

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019804

4123829 - 4152967

29139