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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4153870_4155857_F

Intron Information:

Intron Rank:

143227

Intron Class:

major

Intron Phase:

Intron Coordinates:

4153870 - 4155857

Intron Length:

1988

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TTTTTTTTTCCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

76.9

38.6

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

32.8

-2

3.7

45.9

49.3

Minor BPS

44.4

-0.4

3.6

74.12

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021676

4153215 - 4156624

3410