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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4173500_4177565_F

Intron Information:

Intron Rank:

145064

Intron Class:

major

Intron Phase:

Intron Coordinates:

4173500 - 4177565

Intron Length:

4066

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGTATA

5'SS Class:

major

3'SS Sequence:

TTTTTTTAATCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTTTTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.3

79.7

35.3

Major BPS

87.3

0.93

0.8

36.5

Major PPT

84.6

0.78

0.9

86.5

31.5

Minor 5ss

40.8

-1

2.6

51.4

45.1

Minor BPS

81.7

0.97

0.9

85.33

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028240

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026175

4170001 - 4177675

7675