Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_4354231_4354575_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4354231 - 4354575

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACCTT

5'SS Class:

strong_major

3'SS Sequence:

ATTACTCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TGATATGGAATT

Flanking Amino Acid:

PKERKNAEYKRYLEMLLEYL

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

75.1

41.1

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

67.8

0.4

63.1

38.8

Minor 5ss

43.2

-0.8

3.3

64.9

46.4

Minor BPS

-0.3

2.1

63.4

40.9

Associated Gene:

Gene:

SF3A3

Ensembl Gene ID:

ENSAPLG00000014900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044455

4351650 - 4358963

7314

ENSAPLT00000015585

4351650 - 4358963

7314