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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4366839_4366953_F


Intron Information:

Intron Rank:
1

Intron Class:
minor

Intron Phase:
0

Intron Coordinates:
4366839 - 4366953

Intron Length:
115

Sequence Information:

Terminal Dinucleotides:
AT-AG

5'SS Sequence:
ATC|ATATCCTTT

5'SS Class:
strong_minor

3'SS Sequence:
ACCCCAAATGAAG|G

3'SS Class:
strong_BPS

U2 Branch Point Sequence:
ATCCCAT

U12 Branch Point Sequence:
TGTTCCTTGACC

Flanking Amino Acid:
TLANGATCRIAVQGTLAGGE

Intron Amino Acid Position:
20

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
29.1
-1.3
3.4
45.9
44.7

Major BPS
63.5
0.33
1.2
72.5
34.6

Major PPT
49.3
-0
1.1
46.6
32.8

Minor 5ss
97.1
1.57
0.7
90.7
20.5

Minor BPS
85.4
1.1
1
87.08
29.7

Associated Gene:

Gene:
INPP5B

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4366782 - 4383751
16970