Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_4379362_4379955_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4379362 - 4379955

Intron Length:

594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

GTGTCCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACCAAT

U12 Branch Point Sequence:

TAAATACCAATT

Flanking Amino Acid:

KPVSSVFDIGVKVVNEELYR

Intron Amino Acid Position:

508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

81.8

38.5

Major BPS

64.1

0.35

1.2

33.2

Major PPT

80.5

0.69

0.9

77.2

Minor 5ss

38.9

-1.2

2.8

43.3

43.8

Minor BPS

-0.6

1.9

57.26

38.7

Associated Gene:

Gene:

INPP5B

Ensembl Gene ID:

ENSAPLG00000015547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016262

4366782 - 4383751

16970