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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4382939_4383185_F


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4382939 - 4383185

Intron Length:
247

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAATGCCA

5'SS Class:
major

3'SS Sequence:
TTTCTCCACCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATAAAT

U12 Branch Point Sequence:
TTTTCTCCACCC

Flanking Amino Acid:
CANNYLLSSQIISKLPECHK

Intron Amino Acid Position:
787

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.8
0.66
1
65.1
40.5

Major BPS
74.5
0.61
1
79.6
29.1

Major PPT
77.5
0.62
0.8
70.3
35.3

Minor 5ss
31.1
-2.2
3.2
40.1
45.4

Minor BPS
49
-0
2.1
71.2
40.2

Associated Gene:

Gene:
INPP5B

Ensembl Gene ID:

Chromosome:
24

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4366782 - 4383751
16970