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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4385892_4391919_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4385892 - 4391919

Intron Length:

6028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

AAATGCTTAAAA

Flanking Amino Acid:

SECPETKLKEVKRYQCTFEG

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

84.7

0.78

0.8

77.2

37.1

Minor 5ss

37.8

-1.4

2.7

46.1

Minor BPS

56.8

0.21

1.9

65.63

Associated Gene:

Gene:

MTF1

Ensembl Gene ID:

ENSAPLG00000016056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016768

4385417 - 4400627

15211