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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4392159_4392554_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4392159 - 4392554

Intron Length:

396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGGGTT

5'SS Class:

strong_major

3'SS Sequence:

GCATGCTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATAAAA

U12 Branch Point Sequence:

CAGACCATAAAA

Flanking Amino Acid:

GCEKAFNTLYRLKAHQRLHT

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

77.1

35.1

Major BPS

0.08

60.9

31.3

Major PPT

69.6

0.44

0.9

65.8

40.7

Minor 5ss

33.8

-1.8

54.5

49.7

Minor BPS

48.2

-0.1

1.8

55.9

42.4

Associated Gene:

Gene:

MTF1

Ensembl Gene ID:

ENSAPLG00000016056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016768

4385417 - 4400627

15211