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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4393454_4394501_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4393454 - 4394501

Intron Length:

1048

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGTCTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TGTTTCTTATGT

Flanking Amino Acid:

HLKTHVRTHTGEKPFFCPSN

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

71.5

38.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

74.7

0.56

0.9

69.1

37.1

Minor 5ss

35.6

-1.6

2.9

43.1

37.8

Minor BPS

60.6

0.41

1.9

80.05

Associated Gene:

Gene:

MTF1

Ensembl Gene ID:

ENSAPLG00000016056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016768

4385417 - 4400627

15211