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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4394636_4395492_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4394636 - 4395492

Intron Length:

857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

TAATATTTAACC

Flanking Amino Acid:

NALPNNNVSEDTSHSLCLSD

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

77.3

37.8

Major BPS

79.5

0.73

0.9

36.9

Major PPT

92.1

0.95

0.6

88.1

21.8

Minor 5ss

32.4

-2

2.5

39.5

Minor BPS

68.8

0.57

1.4

73.73

36.4

Associated Gene:

Gene:

MTF1

Ensembl Gene ID:

ENSAPLG00000016056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016768

4385417 - 4400627

15211