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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4408187_4408456_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4408187 - 4408456

Intron Length:

270

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCTGGGGTG

5'SS Class:

major

3'SS Sequence:

AGGGGGCCCTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

GGGGCCCTGAGG

Flanking Amino Acid:

GRGCSDAEGAGGPEGARPVP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.4

0.29

1.3

60.4

41.8

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

41.7

-0.4

1.6

35.9

Minor 5ss

17.6

-3.7

4.1

26.1

38.4

Minor BPS

41.2

-0.8

40.61

43.5

Associated Gene:

Gene:

YRDC

Ensembl Gene ID:

ENSAPLG00000025208

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048400

4408060 - 4410684

2625