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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4408976_4409328_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4408976 - 4409328

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGTCTC

5'SS Class:

major

3'SS Sequence:

TTCTTCCTCGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

CTGCATGTAAAA

Flanking Amino Acid:

LNKDLNPFTSLVGVRIPNHP

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

67.4

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

80.9

0.69

0.7

77.3

24.7

Minor 5ss

37.9

-1.4

3.3

53.5

43.8

Minor BPS

41.6

-0.6

2.1

50.54

40.8

Associated Gene:

Gene:

YRDC

Ensembl Gene ID:

ENSAPLG00000025208

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048400

4408060 - 4410684

2625

ENSAPLT00000041654

4407649 - 4410684

3036

ENSAPLT00000024209

4408060 - 4410339

2280