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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4409449_4410135_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4409449 - 4410135

Intron Length:

687

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGCAC

5'SS Class:

major

3'SS Sequence:

CTCTTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAG

U12 Branch Point Sequence:

TCTTTTTTACAG

Flanking Amino Acid:

SSQASTLTVSEFQDLWPQLS

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

64.3

41.8

Major BPS

59.9

0.25

1.6

59.6

46.8

Major PPT

91.1

0.92

0.6

86.6

24.4

Minor 5ss

31.5

-2.1

3.3

42.7

44.4

Minor BPS

51.6

-0

1.8

59.29

43.1

Associated Gene:

Gene:

YRDC

Ensembl Gene ID:

ENSAPLG00000025208

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048400

4408060 - 4410684

2625

ENSAPLT00000041654

4407649 - 4410684

3036

ENSAPLT00000024209

4408060 - 4410339

2280