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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4410275_4410319_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4410275 - 4410319

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCTGGTGAG

5'SS Class:

major

3'SS Sequence:

CTTTACTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TTTTCTTTACTT

Flanking Amino Acid:

VSGKYTIIRPEMKPSG*

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.3

44.9

Major BPS

0.6

65.6

41.1

Major PPT

82.1

0.72

0.8

76.6

31.8

Minor 5ss

16.8

-3.8

3.6

19.8

30.6

Minor BPS

75.9

0.89

1.5

91.31

32.6

Associated Gene:

Gene:

YRDC

Ensembl Gene ID:

ENSAPLG00000025208

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024209

4408060 - 4410339

2280