Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_4413099_4413569_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4413099 - 4413569

Intron Length:

471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCTCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAC

U12 Branch Point Sequence:

AGTCTCTGAACA

Flanking Amino Acid:

VHENIKYIMDKYGSHAAFYK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

27.2

Major BPS

78.3

0.7

32.1

Major PPT

74.4

0.55

0.8

35.9

Minor 5ss

44.5

-0.6

2.8

38.4

Minor BPS

61.9

0.37

1.4

69.17

36.2

Associated Gene:

Gene:

MANEAL

Ensembl Gene ID:

ENSAPLG00000024518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037566

4411949 - 4414916

2968