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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4446429_4447576_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4446429 - 4447576

Intron Length:

1148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGAGTG

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTTCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

GCTCTTTCCACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.9

41.1

Major BPS

72.7

0.56

30.1

Major PPT

77.5

0.62

0.8

71.8

32.8

Minor 5ss

33.6

-1.9

3.5

39.1

46.1

Minor BPS

44.2

-0.4

1.9

52.9

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016384

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017112

4446364 - 4483546

37183