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Intron Name: Anas_platyrhynchos_platyrhynchos_24_445084_447665_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

445084 - 447665

Intron Length:

2582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTTGACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATAAA

U12 Branch Point Sequence:

CCTTTTTTGACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

38.2

Major BPS

57.2

0.18

1.1

58.3

34.3

Major PPT

81.5

0.71

0.9

78.9

33.1

Minor 5ss

28.6

-2.5

3.5

36.8

47.7

Minor BPS

66.3

0.51

1.2

68.82

38.3

Associated Gene:

Gene:

EYA3

Ensembl Gene ID:

ENSAPLG00000002973

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043657

444992 - 482659

37668