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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4463627_4464182_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4463627 - 4464182

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGC|GTACGTCTC

5'SS Class:

weak_major

3'SS Sequence:

CCTCTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCACCAT

U12 Branch Point Sequence:

GCGGCCTCACCA

Flanking Amino Acid:

PSDPPSASCTRPPSAPRDLV

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

1.4

58.2

46.8

Major BPS

0.08

1.4

42.7

Major PPT

81.7

0.71

0.7

72.7

32.1

Minor 5ss

38.7

-1.3

3.2

48.4

Minor BPS

45.7

-0.3

1.9

51.79

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016384

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044600

4447496 - 4483546

36051

ENSAPLT00000017112

4446364 - 4483546

37183