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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4474337_4475443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4474337 - 4475443

Intron Length:

1107

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAGGATCC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAC

U12 Branch Point Sequence:

CGCTGCTTAAAA

Flanking Amino Acid:

SIKIERIIGTGEFGEICRGC

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

70.7

37.7

Major BPS

60.7

0.27

1.1

67.6

34.6

Major PPT

0.56

0.9

69.4

35.9

Minor 5ss

27.5

-2.6

4.1

Minor BPS

52.4

0.07

1.9

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016384

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017112

4446364 - 4483546

37183

ENSAPLT00000044600

4447496 - 4483546

36051