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Intron Name: Anas_platyrhynchos_platyrhynchos_24_4477853_4477968_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4477853 - 4477968

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TCCTCTTTATCT

Flanking Amino Acid:

GNGVLDSFLRKHEGQFTSTQ

Intron Amino Acid Position:

643

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

88.7

0.96

0.8

36.5

Major PPT

90.2

0.9

0.7

85.3

28.7

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

67.2

0.62

1.6

79.06

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016384

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044600

4447496 - 4483546

36051

ENSAPLT00000017112

4446364 - 4483546

37183